PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_011094-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 191aa    MW: 21014.9 Da    PI: 4.8584
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_011094-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.00063153123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y C+ C++ Fs+   L  H++ H
  NNU_011094-RA 31 YGCTFCKRGFSNAQALGGHMNIH 53
                   67*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.94E-62857No hitNo description
Gene3DG3DSA:3.30.160.601.6E-42857IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.993158IPR007087Zinc finger, C2H2
PROSITE patternPS0002803353IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
METDPPSSEN LDQVSGTSSD EQGQSHQARS YGCTFCKRGF SNAQALGGHM NIHRKDRAKL  60
KQPSSSSSSQ LSLDISQKNP SHPAAVSTEY ELPELESRDD RKSSLNWACV VGSREDVERE  120
EIRVGELRQL SLFVEMPSGS SGDRRSGSCG AGHEERRMQS TYCSAEEGLD LELRLGPEPQ  180
DTSTPGTREF F
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262602.11e-139PREDICTED: uncharacterized protein LOC104601104
TrEMBLA5B2R19e-48A5B2R1_VITVI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-15C2H2 family protein